smRNAs generated by single-stranded and double-stranded silencers

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SRP014462

Arabidopsis thaliana

8 Downloadable Samples

Illumina Genome Analyzer IIx

Submitter Supplied Information

Description

To investigate possible smRNAs linked to TMM silencing by single-stranded and double-stranded silencers, we determined sequences of smRNAs by the Illumina high-throughput sequencing platform and compared silencing efficiency of different strategies. We found that single-stranded silencer alone could promote the production of smRNAs. Overall design: smRNA profiles of 2-week-old wide type seedlings (WT) and different silencers were generated by Illumina Genome Analyzer IIx.

PubMed ID

24492259

Publication Title

Transcriptional silencing of Arabidopsis endogenes by single-stranded RNAs targeting the promoter region.

Total Samples

Submitter’s Institution

No associated institution

Authors

Deng S, Dai H, Arenas C, Wang H, Niu QW, Chua NH

Source Repository

Sequence Read Archive (SRA)

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