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Accession IconSRP150534

Metabolic labeling of Hek293 cells using 4-thiouracil

Organism Icon Homo sapiens
Sample Icon 32 Downloadable Samples
Technology Badge IconIllumina HiSeq 2000

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Description
Hek293 cells were metabolically labelled using 4-thiouracil as described in (Schwalb et al, Science. 2016 Jun 3;352(6290):1225-8) but without fragmentation, and then bulk RNA was prepared for sequencing using the STRT method (Islam et al, Genome Res. 2011 Jul;21(7):1160-7). Samples were incubated in duplicate for 5, 15 and 30 minutes and included an unlabeled control representing the steady-state expression state. Overall design: 2 samples each of 4 incubation times, 2 cDNA preparations, 2 tagmentation replicates, and 2 biological replicates
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32
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