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accession-icon GSE9412
Transcriptional regulation of aldo-keto reductase 1C1 in human colon cancer cells resistant to methotrexate
  • organism-icon Homo sapiens
  • sample-icon 6 Downloadable Samples
  • Technology Badge Icon Affymetrix Human Genome U133A 2.0 Array (hgu133a2)

Description

The abstract of the associated publication (Selga E, No V, Ciudad CJ. Biochemical Pharmacology, 2008) is the following:

Publication Title

Transcriptional regulation of aldo-keto reductase 1C1 in HT29 human colon cancer cells resistant to methotrexate: role in the cell cycle and apoptosis.

Sample Metadata Fields

No sample metadata fields

View Samples
accession-icon GSE11440
Role of Caveolin 1, E-Cadherin, Enolase 2 and PKCa on resistance to methotrexate in human HT29 colon cancer cells
  • organism-icon Homo sapiens
  • sample-icon 5 Downloadable Samples
  • Technology Badge Icon Affymetrix Human Genome U133 Plus 2.0 Array (hgu133plus2)

Description

A summary of the work associated to these microarrays is the following:

Publication Title

Role of caveolin 1, E-cadherin, Enolase 2 and PKCalpha on resistance to methotrexate in human HT29 colon cancer cells.

Sample Metadata Fields

Specimen part, Cell line

View Samples
accession-icon GSE16648
Networking of differentially expressed genes in human cancer cell lines resistant to methotrexate
  • organism-icon Homo sapiens
  • sample-icon 37 Downloadable Samples
  • Technology Badge Icon Affymetrix Human Genome U133 Plus 2.0 Array (hgu133plus2)

Description

This SuperSeries is composed of the SubSeries listed below.

Publication Title

Networking of differentially expressed genes in human cancer cells resistant to methotrexate.

Sample Metadata Fields

Specimen part, Cell line

View Samples
accession-icon GSE16085
Networking of differentially expressed genes in human K562 erythtoblastic leukemia cells resistant to methotrexate
  • organism-icon Homo sapiens
  • sample-icon 5 Downloadable Samples
  • Technology Badge Icon Affymetrix Human Genome U133 Plus 2.0 Array (hgu133plus2)

Description

A summary of the work associated to these microarrays is the following:

Publication Title

Networking of differentially expressed genes in human cancer cells resistant to methotrexate.

Sample Metadata Fields

Specimen part, Cell line

View Samples
accession-icon GSE16070
Networking of differentially expressed genes in human MCF7 breast cancer cells resistant to methotrexate
  • organism-icon Homo sapiens
  • sample-icon 6 Downloadable Samples
  • Technology Badge Icon Affymetrix Human Genome U133 Plus 2.0 Array (hgu133plus2)

Description

A summary of the work associated to these microarrays is the following:

Publication Title

Networking of differentially expressed genes in human cancer cells resistant to methotrexate.

Sample Metadata Fields

Specimen part, Cell line

View Samples
accession-icon GSE16066
Networking of differentially expressed genes in CaCo2 human colon cancer cells resistant to methotrexate
  • organism-icon Homo sapiens
  • sample-icon 5 Downloadable Samples
  • Technology Badge Icon Affymetrix Human Genome U133 Plus 2.0 Array (hgu133plus2)

Description

A summary of the work associated to these microarrays is the following:

Publication Title

Networking of differentially expressed genes in human cancer cells resistant to methotrexate.

Sample Metadata Fields

Specimen part, Cell line

View Samples
accession-icon GSE16082
Networking of differentially expressed genes in human MIA PaCa2 pancreatic cancer cells resistant to methotrexate
  • organism-icon Homo sapiens
  • sample-icon 6 Downloadable Samples
  • Technology Badge Icon Affymetrix Human Genome U133 Plus 2.0 Array (hgu133plus2)

Description

A summary of the work associated to these microarrays is the following:

Publication Title

Networking of differentially expressed genes in human cancer cells resistant to methotrexate.

Sample Metadata Fields

Specimen part, Cell line

View Samples
accession-icon GSE16080
Networking of differentially expressed genes in human MDA-MB-468 breast cancer cells resistant to methotrexate
  • organism-icon Homo sapiens
  • sample-icon 5 Downloadable Samples
  • Technology Badge Icon Affymetrix Human Genome U133 Plus 2.0 Array (hgu133plus2)

Description

A summary of the work associated to these microarrays is the following:

Publication Title

Networking of differentially expressed genes in human cancer cells resistant to methotrexate.

Sample Metadata Fields

Specimen part, Cell line

View Samples
accession-icon GSE16089
Networking of differentially expressed genes in human Saos-2 osteosarcoma cells resistant to methotrexate
  • organism-icon Homo sapiens
  • sample-icon 5 Downloadable Samples
  • Technology Badge Icon Affymetrix Human Genome U133 Plus 2.0 Array (hgu133plus2)

Description

A summary of the work associated to these microarrays is the following:

Publication Title

Networking of differentially expressed genes in human cancer cells resistant to methotrexate.

Sample Metadata Fields

Specimen part, Cell line

View Samples
accession-icon GSE23004
Gene expression profiles in rat mesenteric lymph nodes upon supplementation with conjugated linoleic acid during gestation and suckling
  • organism-icon Rattus norvegicus
  • sample-icon 12 Downloadable Samples
  • Technology Badge Icon Affymetrix Rat Genome 230 2.0 Array (rat2302)

Description

A summary of the work associated to these microarrays is the following:

Publication Title

Gene expression profiles in rat mesenteric lymph nodes upon supplementation with conjugated linoleic acid during gestation and suckling.

Sample Metadata Fields

Specimen part, Disease

View Samples
...

refine.bio is a repository of uniformly processed and normalized, ready-to-use transcriptome data from publicly available sources. refine.bio is a project of the Childhood Cancer Data Lab (CCDL)

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Developed by the Childhood Cancer Data Lab

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Cite refine.bio

Casey S. Greene, Dongbo Hu, Richard W. W. Jones, Stephanie Liu, David S. Mejia, Rob Patro, Stephen R. Piccolo, Ariel Rodriguez Romero, Hirak Sarkar, Candace L. Savonen, Jaclyn N. Taroni, William E. Vauclain, Deepashree Venkatesh Prasad, Kurt G. Wheeler. refine.bio: a resource of uniformly processed publicly available gene expression datasets.
URL: https://www.refine.bio

Note that the contributor list is in alphabetical order as we prepare a manuscript for submission.

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