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Sus scrofa
8 Downloadable Samples
Illumina HiSeq 2500
Description
Transcriptome of connective tissue of swine affected and non-affected with scrotal hernia
Publication Title
No associated publication
Sample Metadata Fields
Sex, Age, Specimen part, Disease
View Samples
SRP049028- Homo sapiens
- 3 Downloadable Samples
- IlluminaHiSeq2500
Description
Generating human serotonergic neurons from fibroblasts
Publication Title
Generation of functional human serotonergic neurons from fibroblasts.
Sample Metadata Fields
No sample metadata fields
View Samples- Sus scrofa
- 4 Downloadable Samples
- Illumina HiSeq 2000
Description
the mRNA expression of pig lung tissue. there are four groups: LW pigs infected with PCV2, LW pigs control, Yorkshire × Landrace (YL) pigs infected with PCV2, Yorkshire × Landrace (YL) pigs control.
Publication Title
No associated publication
Sample Metadata Fields
Sex, Age, Specimen part, Disease, Disease stage, Cell line, Treatment
View Samples- Homo sapiens
- 9 Downloadable Samples
- Illumina HiSeq 4000
Description
RNA-seq was used to verify whether GPR31 is a high affinity receptor of 12-HETE. Normal human liver L02 cells, GPR31 knockout L02 cells and rescue of GPR31 knockout L02 cells under 12-HETE treatment simultaneously was used for RNA-seq.
Publication Title
No associated publication
Sample Metadata Fields
Sex, Specimen part, Cell line
View Samples- Mus musculus
- 6 Downloadable Samples
- Illumina HiSeq 4000
Description
Single-end RNA libraries were prepared from liver of Flox and IRF6-HKO mice with a high fat diet (HFD) for 10 weeks, and were sequenced using HiSeq 4000 in Beijing Genomics Institute. Three independent biological replicate samples were sequenced for each group.
Publication Title
No associated publication
Sample Metadata Fields
Sex, Age, Specimen part, Cell line
View Samples- Gallus gallus
- 60 Downloadable Samples
Affymetrix Chicken Gene 1.0 ST Array (chigene10st)
Description
We used a chicken RNA microarray to identify differentially expressed genes in order to compare two layer lines kept in a small group housing system Eurovent Deutsch.
Publication Title
No associated publication
Sample Metadata Fields
Specimen part
View Samples SRP077708- Homo sapiens
- 38 Downloadable Samples
- Illumina HiScanSQ
Description
The aim of this study is to analyze the transcriptome of epithelial (CD326+ enriched) and immune (CD45+ enriched) fraction in Celiac Disease and controls to find differentially expressed genes.
Publication Title
The methylome of the celiac intestinal epithelium harbours genotype-independent alterations in the HLA region.
Sample Metadata Fields
Sex, Age, Specimen part, Disease
View Samples- Danio rerio
- 1 Downloadable Sample
- IlluminaHiSeq4000
Description
Identification of circular RNAs in zebrafish
Publication Title
Identification and characterization of circular RNAs in zebrafish.
Sample Metadata Fields
No sample metadata fields
View Samples- Saccharomyces cerevisiae
- 43 Downloadable Samples
- Illumina HiSeq 2500
Description
We studied gene expression by RNA-seq in yeast cells in various CDK1-cyclin-depleted states.
Publication Title
The CDK-APC/C Oscillator Predominantly Entrains Periodic Cell-Cycle Transcription.
Sample Metadata Fields
Disease, Cell line
View Samples- Gallus gallus
- 6 Downloadable Samples
- Illumina HiSeq 2500
Description
Apicomplexan protozoans of Eimeria spp. cause coccidiosis, one of the most economically relevant parasitic diseases in chickens. The lack of a complete understanding of molecular mechanisms in host-parasite interaction limits the development of effective control measures. In the present study, RNA sequencing (RNA-seq) was applied to investigate the host mRNA profiles of the cecal mucosa and its contents collected at day 5 post Eimeria maxima (EM) infection.
Publication Title
No associated publication
Sample Metadata Fields
Sex, Specimen part, Cell line
View Samples