submitter_institution:Ume universitet Results

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Microarray (323)

Platform

Affymetrix Arabidopsis ATH1 Genome Array (ath1121501) (125)

Illumina HumanHT-12 V4.0 expression beadchip (reannotation) (111)

Illumina HumanRef-8 v3.0 expression beadchip (Search Key version) (54)

Affymetrix Human Transcriptome Array 2.0 (hta20) (50)

Affymetrix Human Exon 1.0 ST Array [transcript (gene) version (huex10st) (15)

Arabidopsis Gene 1.1 ST Array (aragene11st) (15)

Includes Publication

GSE106260

Immunopathology of childhood celiac disease-Key role of intestinal epithelial cells

Homo sapiens
52 Downloadable Samples
Illumina HumanRef-8 v3.0 expression beadchip, Illumina HumanHT-12 V4.0 expression beadchip

Description

This SuperSeries is composed of the SubSeries listed below.

Publication Title

Immunopathology of childhood celiac disease-Key role of intestinal epithelial cells.

Sample Metadata Fields

Specimen part, Cell line, Treatment

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GSE103992

Gene expression assessed by genome wide hybridization bead array in T84 polarized tight monolayers after challenge with celiac disease-associated bacteria [CTR 32 33 34]

Homo sapiens
12 Downloadable Samples
Illumina HumanHT-12 V4.0 expression beadchip

Description

Analysis of the influence of celiac disease-associated bacteria on intestinal epithelial cells

Publication Title

No associated publication

Sample Metadata Fields

Cell line, Treatment

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GSE103374

Gene expression assessed by genome wide hybridization bead array in T84 polarized tight monolayers after challenge with celiac disease-associated bacteria and gluten [CTR glut bmix, bmix and gluten]

Homo sapiens
12 Downloadable Samples
Illumina HumanHT-12 V4.0 expression beadchip

Description

Analysis of the influence of celiac disease-associated bacteria and gluten on intestinal epithelial cells

Publication Title

Immunopathology of childhood celiac disease-Key role of intestinal epithelial cells.

Sample Metadata Fields

Cell line, Treatment

View Samples

GSE103100

Gene expression assessed by genome wide hybridization bead array in T84 polarized tight monolayers after challenge with celiac disease-associated bacteria and gluten [A grav, Bmix Bmix glut]

Homo sapiens
12 Downloadable Samples
Illumina HumanHT-12 V4.0 expression beadchip

Description

Analysis of the influence of celiac disease-associated bacteria and gluten on intestinal epithelial cells

Publication Title

Immunopathology of childhood celiac disease-Key role of intestinal epithelial cells.

Sample Metadata Fields

Cell line, Treatment

View Samples

GSE103107

Gene expression assessed by genome wide hybridization bead array in T84 polarized tight monolayers after challenge with celiac disease-associated bacteria [CTR 22 28 27]

Homo sapiens
12 Downloadable Samples
Illumina HumanHT-12 V4.0 expression beadchip

Description

Analysis of the influence of celiac disease-associated bacteria on intestinal epithelial cells

Publication Title

Immunopathology of childhood celiac disease-Key role of intestinal epithelial cells.

Sample Metadata Fields

Cell line, Treatment

View Samples

GSE102993

Gene expression assessed by genome wide hybridization bead array in intraepithelial lymphocytes (IELs) isolated from small intestinal biopsies of celiac disease patients with active disease and clinical controls

Homo sapiens
8 Downloadable Samples
Illumina HumanRef-8 v3.0 expression beadchip

Description

Analysis of role of small intestinal intraepithelial lymphocytes (IELs) in the immunopathology of celiac disease

Publication Title

Immunopathology of childhood celiac disease-Key role of intestinal epithelial cells.

Sample Metadata Fields

Specimen part

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GSE102991

Gene expression assessed by genome wide hybridization bead array in intestinal epithelial cells (IECs) isolated from small intestinal biopsies of celiac disease patients with active disease and clinical controls

Homo sapiens
8 Downloadable Samples
Illumina HumanRef-8 v3.0 expression beadchip

Description

Analysis of role of small intestinal epithelial cells (IECs) in the immunopathology of celiac disease

Publication Title

Immunopathology of childhood celiac disease-Key role of intestinal epithelial cells.

Sample Metadata Fields

Specimen part

View Samples

GSE152160

Expression data from "A patient-derived cell atlas of glioblastoma informs precision targeting of the proteasome" (Johansson et al, Cell Reports, 2020)

Homo sapiens
35 Downloadable Samples
Affymetrix Human Transcriptome Array 2.0 (hta20)

Description

We analysed gene expression levels in a panel of pharmacologically patient derived glioblastoma cell lines.

Publication Title

No associated publication

Sample Metadata Fields

Cell line

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GSE72219

The human glioblastoma cell culture resource

Homo sapiens
15 Downloadable Samples
Affymetrix Human Transcriptome Array 2.0 (hta20), Affymetrix Human Exon 1.0 ST Array [transcript (gene) version (huex10st)

Description

This SuperSeries is composed of the SubSeries listed below.

Publication Title

The Human Glioblastoma Cell Culture Resource: Validated Cell Models Representing All Molecular Subtypes.

Sample Metadata Fields

Disease, Cell line

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GSE72218

Expression data from The human glioblastoma cell culture resource: validated cell models representing all molecular subtypes (transcript)

Homo sapiens
15 Downloadable Samples
Affymetrix Human Transcriptome Array 2.0 (hta20)

Description

To explore the degree to which the glioma cell lines remained transcriptionally stable under diverse experimental conditions, we transplanted three different lines (U3020MG, U3047MG and U3065MG) intracranially to NOD-SCID mice; explanted the resulting tumors and cultured the cells for two passages, and then isolated RNA from the cell line prior to transplantation (U3020MG-p10, U3047MG-p7, U3065MG-p10), from the xenograft tumor and from the explanted cells.

Publication Title

The Human Glioblastoma Cell Culture Resource: Validated Cell Models Representing All Molecular Subtypes.

Sample Metadata Fields

Disease

View Samples